Publications of the BrainOmics group

2025

  • Antoine Dufournet, Joel Chavas, Julien Laval, Denis Rivière, Vincent Frouin, & Jean-François Mangin. Towards a better understanding of the genetics of the human cerebral cortex, ISBI 2025 (2025)
  • Corentin Ambroise, Antoine Grigis, Josselin Houenou, & Vincent Frouin. Interpretable and integrative deep learning for discovering brain-behaviour associations (2025) DOI

  • 2024

  • Chloe Gomez, Lynn Uhrig, Vincent Frouin, Edouard Duchesnay, Bechir Jarraya, & Antoine Grigis. Deep learning models reveal the link between dynamic brain connectivity patterns and states of consciousness, SCIENTIFIC REPORTS (2024) DOI
  • Antoine Grigis, Chloe Gomez, Vincent Frouin, Edouard Duchesnay, Lynn Uhrig, & Bechir Jarraya. Revisiting the standard for modeling functional brain network activity - Application to consciousness, PLOS ONE (2024) DOI
  • Rene Freichel, Agatha Lenartowicz, Linda Douw, Johann Kruschwitz, Tobias Banaschewski, Gareth Barker, Arun Bokde, ... IMAGEN Consortium. Unraveling robust brain-behavior links of depressive complaints through granular network models for understanding heterogeneity, JOURNAL OF AFFECTIVE DISORDERS (2024) DOI
  • Frederique Frouin, Fahad Khalid, Vincent Frouin, Volodia Dangouloff-Ros, Nathalie Boddaert, & Jacques Grill. AN MRI-BASED RADIOMIC SIGNATURE TO PREDICT LONG-TERM SURVIVAL IN PATIENTS WITH DIFFUSE INTRINSIC PONTINE GLIOMAS, NEURO-ONCOLOGY (2024) DOI
  • Rune Boen, Tobias Kaufmann, Dennis Meer, Oleksandr Frei, Ingrid Agartz, David Ames, Micael Andersson, ... ENIGMA-CNV Grp. Beyond the Global Brain Differences - Intraindividual Variability Differences in 1q21.1 Distal and 15q11.2 BP1-BP2 Deletion Carriers, BIOLOGICAL PSYCHIATRY (2024) DOI

  • 2023

  • Corentin Ambroise, Vincent Frouin, Benoit Dufumier, Edouard Duchesnay, & Antoine Grigis. MixUp Brain-Cortical Augmentations in Self-supervised Learning, MACHINE LEARNING IN CLINICAL NEUROIMAGING, MLCN 2023 (2023) DOI
  • Lisa Berg, Caroline Gurr, Johanna Leyhausen, Hanna Seelemeyer, Anke Bletsch, Tim Schaefer, Charlotte Pretzsch, ... Christine Ecker. The neuroanatomical substrates of autism and ADHD and their link to putative genomic underpinnings, MOLECULAR AUTISM (2023) DOI
  • Corentin Ambroise, Antoine Grigis, Edouard Duchesnay, & Vincent Frouin. MULTI-VIEW VARIATIONAL AUTOENCODERS ALLOW FOR INTERPRETABILITY LEVERAGING DIGITAL AVATARS - APPLICATION TO THE HBN COHORT, 2023 IEEE 20TH INTERNATIONAL SYMPOSIUM ON BIOMEDICAL IMAGING, ISBI (2023) DOI
  • Hamza Chegraoui, Vincent Guillemot, Amine Rebei, Arnaud Gloaguen, Jacques Grill, Cathy Philippe, & Vincent Frouin. Integrating multiomics and prior knowledge - a study of the Graphnet penalty impact, BIOINFORMATICS (2023) DOI
  • Yannis Elandaloussi, Dorothea Floris, Pierrick Coupe, Edouard Duchesnay, Angeline Mihailov, Antoine Grigis, Indrit Begue, ... Charles Laidi. Understanding the relationship between cerebellar structure and social abilities (vol 14,18, 2023), MOLECULAR AUTISM (2023) DOI
  • Kevin Matos, Claire Cury, Lydia Chougar, Lachlan Strike, Thibault Rolland, Maximilien Riche, Lisa Hemforth, ... Baptiste Couvy-Duchesne. Temporo-basal sulcal connections - a manual annotation protocol and an investigation of sexual dimorphism and heritability, BRAIN STRUCTURE \& FUNCTION (2023) DOI
  • Lisa Hemforth, Claire Cury, Vincent Frouin, Desrivierese Sylvane, Antoine Grigis, Hugh Garavan, Ruediger Bruehl, ... IMAGEN Consortium. Interpretable Automatic Detection of Incomplete Hippocampal Inversions Using Anatomical Criteria, MEDICAL IMAGING 2023 (2023) DOI
  • Yannis Elandaloussi, Dorothea Floris, Pierrick Coupe, Edouard Duchesnay, Angeline Mihailov, Antoine Grigis, Indrit Begue, ... Charles Laidi. Understanding the relationship between cerebellar structure and social abilities, MOLECULAR AUTISM (2023) DOI
  • Fahad Khalid, Jessica Goya-Outi, Thibault Escobar, Volodia Dangouloff-Ros, Antoine Grigis, Cathy Philippe, Nathalie Boddaert, ... Frederique Frouin. Multimodal MRI radiomic models to predict genomic mutations in diffuse intrinsic pontine glioma with missing imaging modalities, FRONTIERS IN MEDICINE (2023) DOI
  • Sarah Baumeister, Carolin Moessnang, Nico Bast, Sarah Hohmann, Pascal Aggensteiner, Anna Kaiser, Julian Tillmann, ... EU-AIMS Grp. Processing of social and monetary rewards in autism spectrum disorders, BRITISH JOURNAL OF PSYCHIATRY (2023) DOI
  • Stella Guldner, Anna Sarvasmaa, Herve Lemaitre, Jessica Massicotte, Helene Vulser, Ruben Miranda, Pauline Bezivin-Frere, ... Jean-Luc Martinot. Longitudinal associations between adolescent catch-up sleep, white-matter maturation and internalizing problems, DEVELOPMENTAL COGNITIVE NEUROSCIENCE (2023) DOI
  • Herve Lemaitre, Yann Le Guen, Amanda Tilot, Jason Stein, Cathy Philippe, Jean-Francois Mangin, Simon Fisher, ... Vincent Frouin. Genetic variations within human gained enhancer elements affect human brain sulcal morphology, NEUROIMAGE (2023) DOI

  • 2022

  • Charles Laidi, Dorothea Floris, Julian Tillmann, Yannis Elandaloussi, Mariam Zabihi, Tony Charman, Thomas Wolfers, ... EU-AIMS Grp. Cerebellar Atypicalities in Autism?, BIOLOGICAL PSYCHIATRY (2022) DOI
  • Antoine Grigis, Chloe Gomez, Vincent Frouin, Lynn Uhrig, & Bechir Jarraya. Interpretable Signature of Consciousness in Resting-State Functional Network Brain Activity, MEDICAL IMAGE COMPUTING AND COMPUTER ASSISTED INTERVENTION, MICCAI 2022, PT I (2022) DOI
  • Benoit Dufumier, Antoine Grigis, Julie Victor, Corentin Ambroise, Vincent Frouin, & Edouard Duchesnay. OpenBHB - a Large-Scale Multi-Site Brain MRI Data-set for Age Prediction and Debiasing, NEUROIMAGE (2022) DOI
  • Jin Li, Bing Liu, Tobias Banaschewski, Arun Bokde, Erin Quinlan, Sylvane Desrivieres, Herta Flor, ... IMAGEN Consortium. Orbitofrontal cortex volume links polygenic risk for smoking with tobacco use in healthy adolescents, PSYCHOLOGICAL MEDICINE (2022) DOI
  • Fahad Khalid, Thibault Escobar, Jessica Goya-Outi, Vincent Frouin, Nathalie Boddaert, Jacques Grill, & Frederique Frouin. ARTIFICIAL INTELLIGENCE FOR DETECTING ACVR1 MUTATIONS IN PATIENTS WITH DIPG USING MRI AND CLINICAL DATA, NEURO-ONCOLOGY (2022)
  • Yasmina Mekki, Vincent Guillemot, Herve Lemaitre, Amaia Carrion-Castillo, Stephanie Forkel, Vincent Frouin, & Cathy Philippe. The genetic architecture of language functional connectivity, NeuroImage (2022) DOI
  • Arnaud Gloaguen, Cathy Philippe, Vincent Frouin, Giulia Gennari, Ghislaine Dehaene-Lambertz, Laurent Le Brusquet, & Arthur Tenenhaus. Multiway generalized canonical correlation analysis, Biostatistics (2022) DOI

  • 2021

  • Tianye Jia, Congying Chu, Yun Liu, Jenny Dongen, Evangelos Papastergios, Nicola Armstrong, Mark Bastin, ... Sylvane Desrivieres. Epigenome-wide meta-analysis of blood DNA methylation and its association with subcortical volumes - findings from the ENIGMA Epigenetics Working Group, MOLECULAR PSYCHIATRY (2021) DOI
  • Teresa Del Bianco, Luke Mason, Tony Charman, Julian Tillman, Eva Loth, Hannah Hayward, Frederick Shic, ... Marcel Zwiers. Temporal Profiles of Social Attention Are Different Across Development in Autistic and Neurotypical People, BIOLOGICAL PSYCHIATRY-COGNITIVE NEUROSCIENCE AND NEUROIMAGING (2021) DOI
  • Solene Brohard-Julien, Vincent Frouin, Vincent Meyer, Smahane Chalabi, Jean-Francois Deleuze, Edith Le Floch, & Christophe Battail. Region-specific expression of young small-scale duplications in the human central nervous system, BMC ECOLOGY AND EVOLUTION (2021) DOI
  • Ida Sonderby, Dennis Meer, Clara Moreau, Tobias Kaufmann, G. Walters, Maria Ellegaard, Abdel Abdellaoui, ... ENIGMA-CNV Grp. 1q21.1 distal copy number variants are associated with cerebral and cognitive alterations in humans, Translational Psychiatry (2021) DOI
  • Mira Tschorn, Robert Lorenz, Paul OReilly, Abraham Reichenberg, Tobias Banaschewski, Arun Bokde, Erin Quinlan, ... IMAGEN Consortium. Differential predictors for alcohol use in adolescents as a function of familial risk, Translational Psychiatry (2021) DOI
  • Slim Karkar, Claire Dandine-Roulland, Jean-Francois Mangin, Yann Le Guen, Cathy Philippe, Jean-Francois Deleuze, Morgane Pierre-Jean, ... Vincent Frouin. Genome-wide haplotype association study in imaging genetics using whole-brain sulcal openings of 16,304 UK Biobank subjects, European Journal Of Human Genetics (2021) DOI
  • Edward Barker, Alex Ing, Francesca Biondo, Tianye Jia, Jean-Baptiste Pingault, Ebba Du Rietz, Yuning Zhang, ... IMAGEN Consortium. Do ADHD-impulsivity and BMI have shared polygenic and neural correlates?, MOLECULAR PSYCHIATRY (2021) DOI
  • Winok Lapidaire, Anna Urrila, Eric Artiges, Ruben Miranda, Helene Vulser, Pauline Bezivin-Frere, Herve Lemaitre, ... IMAGEN Consortium. Irregular sleep habits, regional grey matter volumes, and psychological functioning in adolescents, Plos One (2021) DOI

  • 2020

  • Erin Quinlan, Edward Barker, Qiang Luo, Tobias Banaschewski, Arun Bokde, Uli Bromberg, Christian Buechel, ... IMAGEN Consortium. Peer victimization and its impact on adolescent brain development and psychopathology, MOLECULAR PSYCHIATRY (2020) DOI
  • Frida Bayard, Charlotte Thunell, Christoph Abe, Rita Almeida, Tobias Banaschewski, Gareth Barker, Arun Bokde, ... IMAGEN Consortium. Distinct brain structure and behavior related to ADHD and conduct disorder traits, MOLECULAR PSYCHIATRY (2020) DOI
  • Anna Di Stefano, Alberto Picca, Edouard Saragoussi, Franck Bielle, Francois Ducray, Chiara Villa, Marica Eoli, ... TARGET Grp. Clinical, molecular, and radiomic profile of gliomas with FGFR3-TACC3 fusions, NEURO-ONCOLOGY (2020) DOI
  • Bader Chaarani, Kees-Jan Kan, Scott Mackey, Philip Spechler, Alexandra Potter, Tobias Banaschewski, Sabina Millenet, ... Imagen Consortium. Neural Correlates of Adolescent Irritability and Its Comorbidity With Psychiatric Disorders, JOURNAL OF THE AMERICAN ACADEMY OF CHILD AND ADOLESCENT PSYCHIATRY (2020) DOI
  • Yann Le Guen, Francois Leroy, Cathy Philippe, Jean-Francois Mangin, Ghislaine Dehaene-Lambertz, & Vincent Frouin. Enhancer Locus in ch14q23.1 Modulates Brain Asymmetric Temporal Regions Involved in Language Processing, CEREBRAL CORTEX (2020) DOI
  • Qiang Luo, Lingli Zhang, Chu-Chung Huang, Yan Zheng, Jonathan Kanen, Qi Zhao, Ye Yao, ... IMAGEN Consortium. Association between childhood trauma and risk for obesity - a putative neurocognitive developmental pathway, BMC MEDICINE (2020) DOI
  • J. Tillmann, M. Uljarevic, D. Crawley, G. Dumas, E. Loth, D. Murphy, J. Buitelaar, ... AIMS Grp. Dissecting the phenotypic heterogeneity in sensory features in autism spectrum disorder - a factor mixture modelling approach, MOLECULAR AUTISM (2020) DOI
  • Chun Shen, Qiang Luo, Tianye Jia, Qi Zhao, Sylvane Desrivieres, Erin Quinlan, Tobias Banaschewski, ... IMAGEN Consortium. Neural Correlates of the Dual-Pathway Model for ADHD in Adolescents, AMERICAN JOURNAL OF PSYCHIATRY (2020) DOI
  • Angeline Mihailov, Cathy Philippe, Arnaud Gloaguen, Antoine Grigis, Charles Laidi, Camille Piguet, Josselin Houenou, ... Vincent Frouin. Cortical signatures in behaviorally clustered autistic traits subgroups - a population-based study, TRANSLATIONAL PSYCHIATRY (2020) DOI
  • Alexa Haeger, Jean-Francois Mangin, Alexandre Vignaud, Cyril Poupon, Antoine Grigis, Fawzi Boumezbeur, Vincent Frouin, ... SENIOR Team. Imaging the aging brain - study design and baseline findings of the SENIOR cohort, ALZHEIMERS RESEARCH \& THERAPY (2020) DOI
  • Lea Maricic, Henrik Walter, Annika Rosenthal, Stephan Ripke, Erin Quinlan, Tobias Banaschewski, Gareth Barker, ... IMAGEN Consortium. The IMAGEN study - a decade of imaging genetics in adolescents, MOLECULAR PSYCHIATRY (2020) DOI
  • Tristram Lett, Bob Vogel, Stephan Ripke, Carolin Wackerhagen, Susanne Erk, Swapnil Awasthi, Vassily Trubetskoy, ... IMAGEN Consortium. Cortical Surfaces Mediate the Relationship Between Polygenic Scores for Intelligence and General Intelligence, CEREBRAL CORTEX (2020) DOI
  • A. Picca, A. Di Stefano, E. Saragoussis, F. Bielle, F. Ducray, V. Bourg, L. Bellu, ... M. Sanson. Clinical, molecular and radiomic profile of gliomas with FGFR3-TACC3 fusions, EUROPEAN JOURNAL OF NEUROLOGY (2020)
  • Tao Yu, Tianye Jia, Liping Zhu, Sylvane Desrivieres, Christine Macare, Yan Bi, Arun Bokde, ... IMAGEN Consortium. Cannabis-Associated Psychotic-like Experiences Are Mediated by Developmental Changes in the Parahippocampal Gyrus, JOURNAL OF THE AMERICAN ACADEMY OF CHILD AND ADOLESCENT PSYCHIATRY (2020) DOI
  • Dennis Meer, Ida Sonderby, Tobias Kaufmann, G. Walters, Abdel Abdellaoui, David Ames, Katrin Amunts, ... ENIGMA-CNV Grp. Association of Copy Number Variation of the 15q11.2 BP1-BP2 Region With Cortical and Subcortical Morphology and Cognition, JAMA PSYCHIATRY (2020) DOI
  • Gabriel Robert, Qiang Luo, Tao Yu, Congying Chu, Alex Ing, Tianye Jia, Dimitri Orfanos, ... IMAGEN Consortium. Association of Gray Matter and Personality Development With Increased Drunkenness Frequency During Adolescence, JAMA PSYCHIATRY (2020) DOI
  • Pauline Frere, Nora Vetter, Eric Artiges, Irina Filippi, Ruben Miranda, Helene Vulser, Marie-Laure Paillere-Martinot, ... Imagen Consortium. Sex effects on structural maturation of the limbic system and outcomes on emotional regulation during adolescence, NEUROIMAGE (2020) DOI
  • Carolin Moessnang, Sarah Baumeister, Julian Tillmann, David Goyard, Tony Charman, Sara Ambrosino, Simon Baron-Cohen, ... EU-AIMS Grp. Social brain activation during mentalizing in a large autism cohort - the Longitudinal European Autism Project, MOLECULAR AUTISM (2020) DOI
  • Ida Sonderby, Omar Gustafsson, Nhat Doan, Derrek Hibar, Sandra Martin-Brevet, Abdel Abdellaoui, David Ames, ... ENIGMA-CNV Grp. Dose response of the 16p11.2 distal copy number variant on intracranial volume and basal ganglia (vol 25, pg 584, 2018), MOLECULAR PSYCHIATRY (2020) DOI
  • Ida Sonderby, Omar Gustafsson, Nhat Doan, Derrek Hibar, Sandra Martin-Brevet, Abdel Abdellaoui, David Ames, ... 2 European Consortium ENIGMA. Dose response of the 16p11.2 distal copy number variant on intracranial volume and basal ganglia, MOLECULAR PSYCHIATRY (2020) DOI
  • Erin Quinlan, Tobias Banaschewski, Gareth Barker, Arun Bokde, Uli Bromberg, Christian B\uchel, Sylvane Desrivi\eres, ... Gunter Schumann. Identifying biological markers for improved precision medicine in psychiatry, Molecular Psychiatry (2020) DOI
  • Angeline Mihailov, Cathy Philippe, Arnaud Gloaguen, Antoine Grigis, Charles Laidi, Camille Piguet, Josselin Houenou, ... Vincent Frouin. Cortical signatures in behaviorally clustered autistic traits subgroups - a population-based study, Translational Psychiatry (2020) DOI
  • Yasmina Mekki, Vincent Guillemot, Cathy Philippe, & Vincent Frouin. Genome-wide association study of language networks functional connectivity, Organization for Human Brain Mapping (Procs of) (2020)
  • Lea Mascarell Mari\vcic, Henrik Walter, Annika Rosenthal, Stephan Ripke, Erin Quinlan, Tobias Banaschewski, Gareth Barker, ... Amir Tahmasebi. The IMAGEN study - a decade of imaging genetics in adolescents, Molecular Psychiatry (2020) DOI
  • Yann Le Guen, François Leroy, Cathy Philippe, Jean-François Mangin, Ghislaine Dehaene-Lambertz, & Vincent Frouin. Enhancer Locus in ch14q23.1 Modulates Brain Asymmetric Temporal Regions Involved in Language Processing, Cerebral Cortex (2020) DOI
  • Slim Karkar, Cathy Philippe, Alexa Hager, Jean-Francois Mangin, & Vincent Frouin. Alzheimers Polygenic Risk Score in general population reveals new biomarkers for early diagnosis, Alzheimers Association International Conference (in procs of) (2020)
  • Slim Karkar, Claire Dandine-Roulland, Jean-François Mangin, Yann Le Guen, Cathy Philippe, Jean-François Deleuze, Morgane Pierre-Jean, ... Vincent Frouin. Genome-wide haplotype association study in imaging genetics using whole-brain sulcal openings of 16,304 UK Biobank subjects, bioRxiv (2020) DOI
  • Antoine Grigis, Jordy Tasserie, Vincent Frouin, Bechir Jarraya, & Lynn Uhrig. Predicting Cortical Signatures of Consciousness using Dynamic Functional Connectivity Graph-Convolutional Neural Networks, bioRxiv Neuroscience (2020) DOI
  • Claire Cury, Marzia Scelsi, Roberto Toro, Vincent Frouin, Eric Artiges, Antoine Grigis, Andreas Heinz, ... Olivier Colliot. Genome wide association study of incomplete hippocampal inversion in adolescents, PLOS ONE (2020) DOI